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卜德超  副研究员  


                                        
研究方向：

                                        
所属部门：泛在计算系统研究中心

                                        
导师类别：硕导计算机应用技术

                                        
联系方式：budechao@ict.ac.cn

                                        
个人网页：https://scholar.google.com/citations?user=o-CZlyYAAAAJ

                                    

                                

                            


                        

                    

                

            

            

                

                    

                        

                            

                                
简       历：

                                

                                    
2021年9月 — 今：中科院计算所，副研究员
2015年7月 — 2021年8月：中科院计算所，助理研究员
2009年7月 — 2015年6月：中科院计算所，硕博连读
2005年9月 — 2009年6月：山东大学，本科生

                                

                            

                            

                                
主要论著：

                                

                                    
期刊文章:
[1] Dechao Bu, Haitao Luo, Peipei Huo, Zhihao Wang, Shan Zhang, Zihao He, Yang Wu, Lianhe Zhao, Jingjia Liu, Jincheng Guo, Shuangsang Fang, Wanchen Cao, Lan Yi, Yi Zhao, Lei Kong.KOBAS-i: intelligent prioritization and exploratory visualization of biological functions for gene enrichment analysis. Nucleic Acids Research. Jul 2;49(W1):W317-W325. (IF=17，SCI高被引论文)
[2] Junya Ning#, Yingnan Ye#, Dechao Bu#, Gang Zhao, Tianqiang Song, Pengpeng Liu, Wenwen Yu, Hailong Wang, Hui Li, Xiubao Ren, Guoguang Ying, Yi Zhao*, Jinpu Yu*.Imbalance of TGF-β1/BMP-7 pathways induced by M2-polarized macrophages promotes hepatocellular carcinoma aggressiveness. Molecular Therapy. Jun 2;29(6):2067-2087. (Cell子刊，共一作，IF=11)
[3] Yuwei Zhang#, Dechao Bu#, Peipei Huo, Zhihao Wang, Hao Rong, Yanguo Li, Jingjia Liu, Meng Ye, Yang Wu, Zheng Jiang, Qi Liao*, Yi Zhao*.ncFANs v2.0: an integrative platform for functional annotation of non-coding RNAs. Nucleic Acids Research. Jul 2;49(W1):W459-W468. (共一作，IF=17）
[4] Dechao Bu#, Yan Xia#, JiaYuan Zhang#, Wanchen Cao1, Peipei Huo, Zhihao Wang, Zihao He, Linyi Ding, Yang Wu, Shan Zhang, Kai Gao, He Yu, Tiegang Liu, Xia Ding*, Xiaohong Gu*, Yi Zhao*.FangNet: Mining herb hidden knowledge from TCM clinical effective formulas using structure network algorithm. Computational and Structural Biotechnology Journal. Dec 4;19:62-71. (IF=7.3)
[5] Haitao Luo#，Dechao Bu#，Lijuan Shao#，Yang Li，Liang Sun，Ce Wang，Jing Wang，Wei Yang，Xiaofe iYang，Jun Dong，Yi Zhao*，Furong Li*. Single-cell Long Non-coding RNA Landscape of T Cells in Human Cancer Immunity. Genomics Proteomics Bioinformatics. 2021 Jul 17:S1672-0229(21)00155-8. doi: 10.1016/j.gpb.2021.02.006. (IF=7.7)
[6] Dechao Bu#, Kuntao Yu#, Silong Sun, Chaoyong Xie, Geir Skogerb？, Ruoyu Miao, Hui Xiao, Qi Liao, Haitao Luo, Guoguang Zhao, Haitao Zhao, Zhiyong Liu, Changning Liu, Runsheng Chen, Yi Zhao.NONCODE v3.0: integrative annotation of long noncoding RNAs. Nucleic Acids Research. Jan;40(Database issue):D210-5. (IF=17，SCI高被引论文)
[6] Haitao Luo#, Dechao Bu#, Liang Sun, Shuangsang Fang, Zhiyong Liu, Yi Zhao*.Identification and function annotation of long intervening noncoding RNAs. Briefings in Bioinformatics. Sep 1;18(5):789-797. (共一作，IF=11.6)
[7] Guoguang Zhao#, Dechao Bu#, Changning Liu, Jing Li, Jian Yang, Zhiyong Liu, Yi Zhao*, Runsheng Chen*. CloudLCA: finding the lowest common ancestor in metagenome analysis using cloud computing. Protein & Cell. Feb;3(2):148-52. (共一作，IF=15) 
专利：
[1] 赵屹，卜德超，周恒；高通量测序序列的存储方法和查询方法；2020；ZL201710549780.9.
[2] 赵屹，卜德超，赵连鹤；一种基于二联密码子的测序数据压缩方法；2019；ZL201610380177.8.

                                

                            

                            

                                
科研项目：

                                

                                    
国家自然科学基金青年基金：基于比较基因组学的长非编码基因同源预测算法及序列结构和表达保守性研究, 课题负责人

                                

                            

                            

                                
获奖及荣誉：

                                

                                    
[1] 第一批国家中医药传承创新团队（全国10家）--中医疫病学多学科交叉人才培养对象（全国9名)
[2] 浙江省生物信息学会自然科学奖一等奖